PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR01G32640.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family bZIP
Protein Properties Length: 542aa    MW: 59529.7 Da    PI: 6.5601
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR01G32640.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.49.9e-11222252434
                      XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeek 34 
                       k err+++NReAAr+sR+RKka++++Le+ 
  LPERR01G32640.1 222 AKTERRLAQNREAARKSRLRKKAYVQNLETS 252
                      799*************************974 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.4E-6219285IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.278221265IPR004827Basic-leucine zipper domain
PfamPF001709.0E-8222253IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.04E-7223266No hitNo description
Gene3DG3DSA:1.20.5.1701.5E-7223267No hitNo description
CDDcd147083.95E-20223275No hitNo description
PROSITE patternPS000360226241IPR004827Basic-leucine zipper domain
PfamPF141441.3E-29304378IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 542 aa     Download sequence    Send to blast
MVQGEESSWR MAASTHHERA IPLNQALAYG VQAHASASVA ATPPASFLDF QPAAAAAAYF  60
GELEEALIHG AANAAGVVDP GMIRGGDVHT KSAATAGYLA ARPPTLEIFP SWPTRQQQQL  120
HSGNSQSVGS TTDSSSAQNT MPQMELVSPA SIRASSEQQQ QPQPGQEVMM VTTDDYSYKP  180
GLAAASPSFQ QHQLQQQPLH GGGDHDKRKL GSTRKEGKLV DAKTERRLAQ NREAARKSRL  240
RKKAYVQNLE TSRVRLQQIE QELQRARSQG LLLGGCSAAG DTSSGAAVFD MEYARWLDDD  300
SKRLTELRGG LQAHLLDTNL GLIVEECMQH YDELFQLKAS LARSDVFHLL TGTWATPAER  360
CFLWMGGFRP SDLLKILIQQ LDPLTEQQML GIYNLQQSSE QAEEALGQGL QQLHQSLADT  420
VAAGTLNNDG PGVPNYMSLM AIALDKLANL ESFYQQVTNL VNVQADNLRQ QTLHQLHRIL  480
TTRQAARCFL SIGEYYRRLR ALSNLWSSRP CESFIGTESV SPPGTELQTM HHQPQQNQYS  540
GF
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00131DAPTransfer from AT1G08320Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1013380.0AK101338.1 Oryza sativa Japonica Group cDNA clone:J033034J12, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006645055.10.0PREDICTED: transcription factor TGA2-like isoform X2
SwissprotO241601e-115TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLA0A0D9V8160.0A0A0D9V816_9ORYZ; Uncharacterized protein
STRINGOB01G46780.10.0(Oryza brachyantha)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38093166
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.21e-130bZIP family protein